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<li class="navelem"><a class="el" href="namespace_s_p_h.html">SPH</a></li><li class="navelem"><a class="el" href="class_s_p_h_1_1_aliev_panfilow_model.html">AlievPanfilowModel</a></li>  </ul>
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<a href="#pro-methods">Protected Member Functions</a> &#124;
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<a href="class_s_p_h_1_1_aliev_panfilow_model-members.html">List of all members</a>  </div>
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<p>The simplest Electrophysiology Reaction model, which reduces the complex of array of ion currents to two variables that describe excitation and recovery.  
 <a href="class_s_p_h_1_1_aliev_panfilow_model.html#details">More...</a></p>

<p><code>#include &lt;<a class="el" href="diffusion__reaction_8h_source.html">diffusion_reaction.h</a>&gt;</code></p>

<p>Inherits <a class="el" href="class_s_p_h_1_1_electro_physiology_reaction.html">SPH::ElectroPhysiologyReaction</a>.</p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pro-methods"></a>
Protected Member Functions</h2></td></tr>
<tr class="memitem:ae4a46f2b93b84cec09171ff192ccaa3b"><td class="memItemLeft" align="right" valign="top"><a id="ae4a46f2b93b84cec09171ff192ccaa3b"></a>
virtual Real&#160;</td><td class="memItemRight" valign="bottom"><b>getProductionRateIonicCurrent</b> (StdVec&lt; StdLargeVec&lt; Real &gt;&gt; &amp;species, <a class="el" href="classsize__t.html">size_t</a> particle_i) override</td></tr>
<tr class="separator:ae4a46f2b93b84cec09171ff192ccaa3b"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:af0af27b6801cb38907deb9f8d165e233"><td class="memItemLeft" align="right" valign="top"><a id="af0af27b6801cb38907deb9f8d165e233"></a>
virtual Real&#160;</td><td class="memItemRight" valign="bottom"><b>getLossRateIonicCurrent</b> (StdVec&lt; StdLargeVec&lt; Real &gt;&gt; &amp;species, <a class="el" href="classsize__t.html">size_t</a> particle_i) override</td></tr>
<tr class="separator:af0af27b6801cb38907deb9f8d165e233"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:abb9681bfb732df11c199144eecb4c92b"><td class="memItemLeft" align="right" valign="top"><a id="abb9681bfb732df11c199144eecb4c92b"></a>
virtual Real&#160;</td><td class="memItemRight" valign="bottom"><b>getProductionRateGateVariable</b> (StdVec&lt; StdLargeVec&lt; Real &gt;&gt; &amp;species, <a class="el" href="classsize__t.html">size_t</a> particle_i) override</td></tr>
<tr class="separator:abb9681bfb732df11c199144eecb4c92b"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aed33acf161409f9f5569737b945c66b2"><td class="memItemLeft" align="right" valign="top"><a id="aed33acf161409f9f5569737b945c66b2"></a>
virtual Real&#160;</td><td class="memItemRight" valign="bottom"><b>getLossRateGateVariable</b> (StdVec&lt; StdLargeVec&lt; Real &gt;&gt; &amp;species, <a class="el" href="classsize__t.html">size_t</a> particle_i) override</td></tr>
<tr class="separator:aed33acf161409f9f5569737b945c66b2"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a93a96d67615c5cb5bc3d7e1cc8a7f54e"><td class="memItemLeft" align="right" valign="top"><a id="a93a96d67615c5cb5bc3d7e1cc8a7f54e"></a>
virtual void&#160;</td><td class="memItemRight" valign="bottom"><b>assignDerivedReactionParameters</b> () override</td></tr>
<tr class="separator:a93a96d67615c5cb5bc3d7e1cc8a7f54e"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="inherit_header pro_methods_class_s_p_h_1_1_electro_physiology_reaction"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_class_s_p_h_1_1_electro_physiology_reaction')"><img src="closed.png" alt="-"/>&#160;Protected Member Functions inherited from <a class="el" href="class_s_p_h_1_1_electro_physiology_reaction.html">SPH::ElectroPhysiologyReaction</a></td></tr>
<tr class="memitem:a3f471b5c40725cec9522f0211a05f9e5 inherit pro_methods_class_s_p_h_1_1_electro_physiology_reaction"><td class="memItemLeft" align="right" valign="top"><a id="a3f471b5c40725cec9522f0211a05f9e5"></a>
virtual Real&#160;</td><td class="memItemRight" valign="bottom"><b>getProductionActiveContractionStress</b> (StdVec&lt; StdLargeVec&lt; Real &gt;&gt; &amp;species, <a class="el" href="classsize__t.html">size_t</a> particle_i)</td></tr>
<tr class="separator:a3f471b5c40725cec9522f0211a05f9e5 inherit pro_methods_class_s_p_h_1_1_electro_physiology_reaction"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a48441634a8f69fe3c62358edab7458a9 inherit pro_methods_class_s_p_h_1_1_electro_physiology_reaction"><td class="memItemLeft" align="right" valign="top"><a id="a48441634a8f69fe3c62358edab7458a9"></a>
virtual Real&#160;</td><td class="memItemRight" valign="bottom"><b>getLossRateActiveContractionStress</b> (StdVec&lt; StdLargeVec&lt; Real &gt;&gt; &amp;species, <a class="el" href="classsize__t.html">size_t</a> particle_i)</td></tr>
<tr class="separator:a48441634a8f69fe3c62358edab7458a9 inherit pro_methods_class_s_p_h_1_1_electro_physiology_reaction"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pro-attribs"></a>
Protected Attributes</h2></td></tr>
<tr class="memitem:ac926a3fcc24e3f7b65e2d87fa59662b4"><td class="memItemLeft" align="right" valign="top">Real&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_aliev_panfilow_model.html#ac926a3fcc24e3f7b65e2d87fa59662b4">k_</a></td></tr>
<tr class="separator:ac926a3fcc24e3f7b65e2d87fa59662b4"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a7df5e127f250cd09c9bf8a6a8c7ec47b"><td class="memItemLeft" align="right" valign="top"><a id="a7df5e127f250cd09c9bf8a6a8c7ec47b"></a>
Real&#160;</td><td class="memItemRight" valign="bottom"><b>a_</b></td></tr>
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<tr class="memitem:a90e517c64366aad4bebc2c291b48c92e"><td class="memItemLeft" align="right" valign="top"><a id="a90e517c64366aad4bebc2c291b48c92e"></a>
Real&#160;</td><td class="memItemRight" valign="bottom"><b>b_</b></td></tr>
<tr class="separator:a90e517c64366aad4bebc2c291b48c92e"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a5ac65aa96fb79e45019efbc8990209de"><td class="memItemLeft" align="right" valign="top"><a id="a5ac65aa96fb79e45019efbc8990209de"></a>
Real&#160;</td><td class="memItemRight" valign="bottom"><b>mu_1_</b></td></tr>
<tr class="separator:a5ac65aa96fb79e45019efbc8990209de"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a3a3b859a4f40fe22ffe41700a263a24d"><td class="memItemLeft" align="right" valign="top"><a id="a3a3b859a4f40fe22ffe41700a263a24d"></a>
Real&#160;</td><td class="memItemRight" valign="bottom"><b>mu_2_</b></td></tr>
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<tr class="memitem:afdea2cd8961f45f2c2bf9b7b4e1fc30a"><td class="memItemLeft" align="right" valign="top"><a id="afdea2cd8961f45f2c2bf9b7b4e1fc30a"></a>
Real&#160;</td><td class="memItemRight" valign="bottom"><b>epsilon_</b></td></tr>
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<tr class="memitem:ab154be2933e708a1f6556dd766321fe5"><td class="memItemLeft" align="right" valign="top"><a id="ab154be2933e708a1f6556dd766321fe5"></a>
Real&#160;</td><td class="memItemRight" valign="bottom"><b>c_m_</b></td></tr>
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<tr class="inherit_header pro_attribs_class_s_p_h_1_1_electro_physiology_reaction"><td colspan="2" onclick="javascript:toggleInherit('pro_attribs_class_s_p_h_1_1_electro_physiology_reaction')"><img src="closed.png" alt="-"/>&#160;Protected Attributes inherited from <a class="el" href="class_s_p_h_1_1_electro_physiology_reaction.html">SPH::ElectroPhysiologyReaction</a></td></tr>
<tr class="memitem:a668e466277d5cb620715fa6947f74105 inherit pro_attribs_class_s_p_h_1_1_electro_physiology_reaction"><td class="memItemLeft" align="right" valign="top"><a id="a668e466277d5cb620715fa6947f74105"></a>
Real&#160;</td><td class="memItemRight" valign="bottom"><b>k_a_</b></td></tr>
<tr class="separator:a668e466277d5cb620715fa6947f74105 inherit pro_attribs_class_s_p_h_1_1_electro_physiology_reaction"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a2cbb6753c60e1306f80e0b28e0627e7a inherit pro_attribs_class_s_p_h_1_1_electro_physiology_reaction"><td class="memItemLeft" align="right" valign="top"><a id="a2cbb6753c60e1306f80e0b28e0627e7a"></a>
<a class="el" href="classsize__t.html">size_t</a>&#160;</td><td class="memItemRight" valign="bottom"><b>voltage_</b></td></tr>
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<tr class="memitem:acea1f83e6e933b54ef80b5ba32d5cb30 inherit pro_attribs_class_s_p_h_1_1_electro_physiology_reaction"><td class="memItemLeft" align="right" valign="top"><a id="acea1f83e6e933b54ef80b5ba32d5cb30"></a>
<a class="el" href="classsize__t.html">size_t</a>&#160;</td><td class="memItemRight" valign="bottom"><b>gate_variable_</b></td></tr>
<tr class="separator:acea1f83e6e933b54ef80b5ba32d5cb30 inherit pro_attribs_class_s_p_h_1_1_electro_physiology_reaction"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ac8a5bfa2c65d105b4532c943559e0e2c inherit pro_attribs_class_s_p_h_1_1_electro_physiology_reaction"><td class="memItemLeft" align="right" valign="top"><a id="ac8a5bfa2c65d105b4532c943559e0e2c"></a>
<a class="el" href="classsize__t.html">size_t</a>&#160;</td><td class="memItemRight" valign="bottom"><b>active_contraction_stress_</b></td></tr>
<tr class="separator:ac8a5bfa2c65d105b4532c943559e0e2c inherit pro_attribs_class_s_p_h_1_1_electro_physiology_reaction"><td class="memSeparator" colspan="2">&#160;</td></tr>
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="inherited"></a>
Additional Inherited Members</h2></td></tr>
<tr class="inherit_header pub_methods_class_s_p_h_1_1_electro_physiology_reaction"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_class_s_p_h_1_1_electro_physiology_reaction')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="class_s_p_h_1_1_electro_physiology_reaction.html">SPH::ElectroPhysiologyReaction</a></td></tr>
<tr class="memitem:a6a57a8652274b45fdcc52cdc5944a44f inherit pub_methods_class_s_p_h_1_1_electro_physiology_reaction"><td class="memItemLeft" align="right" valign="top"><a id="a6a57a8652274b45fdcc52cdc5944a44f"></a>
void&#160;</td><td class="memItemRight" valign="bottom"><b>initializeElectroPhysiologyReaction</b> (<a class="el" href="classsize__t.html">size_t</a> voltage, <a class="el" href="classsize__t.html">size_t</a> gate_variable, <a class="el" href="classsize__t.html">size_t</a> active_contraction_stress)</td></tr>
<tr class="separator:a6a57a8652274b45fdcc52cdc5944a44f inherit pub_methods_class_s_p_h_1_1_electro_physiology_reaction"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="inherit_header pub_attribs_class_s_p_h_1_1_base_reaction_model"><td colspan="2" onclick="javascript:toggleInherit('pub_attribs_class_s_p_h_1_1_base_reaction_model')"><img src="closed.png" alt="-"/>&#160;Public Attributes inherited from <a class="el" href="class_s_p_h_1_1_base_reaction_model.html">SPH::BaseReactionModel</a></td></tr>
<tr class="memitem:a5d7b0f83c36dd9b3efd1c5a8c74f2073 inherit pub_attribs_class_s_p_h_1_1_base_reaction_model"><td class="memItemLeft" align="right" valign="top"><a id="a5d7b0f83c36dd9b3efd1c5a8c74f2073"></a>
<a class="el" href="namespace_s_p_h.html#abae56fd7f25f13487c7943ce4681d0ce">IndexVector</a>&#160;</td><td class="memItemRight" valign="bottom"><b>reactive_species_</b></td></tr>
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<tr class="memitem:a910ab731d18d21e073360a0e837e9dc9 inherit pub_attribs_class_s_p_h_1_1_base_reaction_model"><td class="memItemLeft" align="right" valign="top"><a id="a910ab731d18d21e073360a0e837e9dc9"></a>
StdVec&lt; <a class="el" href="namespace_s_p_h.html#a341a68e44d4d73463e7fcfe4f09e521e">ReactionFunctor</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><b>get_production_rates_</b></td></tr>
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<tr class="memitem:ac9370e5551fc733dccfa12e9364bb27d inherit pub_attribs_class_s_p_h_1_1_base_reaction_model"><td class="memItemLeft" align="right" valign="top"><a id="ac9370e5551fc733dccfa12e9364bb27d"></a>
StdVec&lt; <a class="el" href="namespace_s_p_h.html#a341a68e44d4d73463e7fcfe4f09e521e">ReactionFunctor</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><b>get_loss_rates_</b></td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>The simplest Electrophysiology Reaction model, which reduces the complex of array of ion currents to two variables that describe excitation and recovery. </p>
</div><h2 class="groupheader">Member Data Documentation</h2>
<a id="ac926a3fcc24e3f7b65e2d87fa59662b4"></a>
<h2 class="memtitle"><span class="permalink"><a href="#ac926a3fcc24e3f7b65e2d87fa59662b4">&#9670;&nbsp;</a></span>k_</h2>

<div class="memitem">
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          <td class="memname">Real SPH::AlievPanfilowModel::k_</td>
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<p>Parameters for two variable cell model. </p>

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<hr/>The documentation for this class was generated from the following files:<ul>
<li>SPHINXsys/src/shared/materials/<a class="el" href="diffusion__reaction_8h_source.html">diffusion_reaction.h</a></li>
<li>SPHINXsys/src/shared/materials/<a class="el" href="diffusion__reaction_8cpp.html">diffusion_reaction.cpp</a></li>
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